COSIM PublicationsBelow is a somewhat complete list of peer-reviewed publications by COSIM staff, sorted chronologically. The links generally point to publisher web pages and may not show the article if you or your site do not hold an online subscription. 2006Collins, W. D., and Coauthors, 2006: The Community Climate System Model Version 3 (CCSM3). Journal of Climate, 19, 2122-2143. Domingues, C. M., S. E. Wijffels, M. E. Maltrud, J. A. Church, and M. Tomczak, 2006: Role of eddies in cooling the Leeuwin Current. Geophysical Research Letters, 33. Dukowicz, J. K., 2006: Structure of the barotropic mode in layered ocean models. Ocean Modelling, 11, 49-68. Gent, P. R., F. O. Bryan, G. Danabasoglu, K. Lindsay, D. Tsumune, M. W. Hecht, and S. C. Doney, 2006: Ocean chlorofluorocarbon and heat uptake during the twentieth century in the CCSM3. Journal of Climate, 19, 2366-2381. Hecht, M. W., 2006: Forward-in-time upwind-weighted methods in ocean modelling. International Journal for Numerical Methods in Fluids, 50, 1159-1173. Holland, M. M., C. M. Bitz, E. C. Hunke, W. H. Lipscomb, and J. L. Schramm, 2006: Influence of the sea ice thickness distribution on polar climate in CCSM3. Journal of Climate, 19, 2398-2414. Kim, J. G., E. C. Hunke, and W. H. Lipscomb, 2006: Sensitivity analysis and parameter tuning scheme for global sea-ice modeling. Ocean Modelling, 14, 61-80. Kim, J. G., E. C. Hunke, and W. H. Lipscomb, 2006: A sensitivity-enhanced simulation approach for Community Climate System Model. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 3994 LNCS - IV, 533-540. Kurien, S., L. Smith, and B. Wingate, 2006: On the two-point correlation of potential vorticity in rotating and stratified turbulence. Journal of Fluid Mechanics, 555, 131-140. McClean, J. L., M. E. Maltrud, and F. O. Bryan, 2006: Quantitative measures of the fidelity of eddy-resolving ocean models. Oceanography, 19, 104-117. Nadiga, B. T., 2006: On zonal jets in oceans. Geophysical Research Letters, 33, L10601. Nadiga, B. T., M. Taylor, and J. Lorenz, 2006: Ocean modelling for climate studies: Eliminating short time scales in long-term, high-resolution studies of ocean circulation. Mathematical and Computer Modelling, 44, 870-886. Peacock, S., and M. Maltrud, 2006: Transit-time distributions in a global ocean model. Journal of Physical Oceanography, 36, 474-495. Zupanski, M., and Coauthors, 2006: Initiation of ensemble data assimilation. Tellus, Series A (Dynamic Meteorology and Oceanography), 58A, 159-170.
2005Bitz, C. M., M. M. Holland, E. C. Hunke, and R. E. Moritz, 2005 Maintenance of the sea-ice edge. Journal of Climate, 18, 2903-2921. Bleck, R., 2005: On the use of hybrid vertical coordinates in ocean circulation modeling. An Integrated View of Oceanography: Ocean Weather Forecasting in the 21st Century, E. Chassignet, and J. Verron, Eds., Kluwer Acad. Publ., 109-126. Bleck, R., 2005: Uncertainties in Climate Prediction: The Ocean Perspective.. Los Alamos Science, 29, 42-55. Dijkstra, H. A., and W. Weijer, 2005 Stability of the global ocean circulation: basic bifurcation diagrams. Journal of Physical Oceanography, 35, 933-948. Drake, J. B., P. W. Jones, and G. R. Carr, 2005 Overview of the software design of the community climate system model. International Journal of High Performance Computing Applications, 19, 177-186. Holland, M. M., C. M. Bitz, and E. C. Hunke, 2005 Mechanisms forcing an Antarctic dipole in simulated sea ice and surface ocean conditions. Journal of Climate, 18, 2052-2066. Holm, D. D., C. Jeffery, S. K. Kurien, D. Livescu, M. A. Taylor, and B. A. Wingate, 2005: The LANS-alpha Model for Computing Turbulence: Origins, Results, and Open Problems. Los Alamos Science, 29, 152. Holm, D. D., and B. I. A. Wingate, 2005 Baroclinic instabilities of the two-layer quasigeostrophic alpha model. Journal of Physical Oceanography, 35, 1287-1296. Hunke, E. C., J. A. Lysne, M. W. Hecht, and M. E. Maltrud, 2005 GM vs biharmonic ocean mixing in the Arctic. Journal of Physics: Conference Series, 16, 348-352. Jones, P. W., P. H. Worley, Y. Yoshida, J. B. White, and J. Levesque, 2005 Practical performance portability in the parallel ocean program (POP). Concurrency and Computation Practice & Experience, 17, 1317-1327. Kerbyson, D. J., and P. W. Jones, 2005 A performance model of the Parallel Ocean Program. International Journal of High Performance Computing Applications, 19, 261-276. Lipscomb, W. H., and T. D. Ringler, 2005 An incremental remapping transport scheme on a spherical geodesic grid. Monthly Weather Review, 133, 2335-2350. Maltrud, M. E., and J. L. McClean, 2005 An eddy resolving global 1/10 degrees ocean simulation. Ocean Modelling, 8, 31-54. McClean, J. L., and Coauthors, 2005: Towards a high-resolution global coupled navy prediction system. Annual Conference on High Performance Computing Modernization Program; June 27, 2005 - June 30, 2006; Nashville, TN, Nashville, TN, LOS ALAMITOS:IEEE COMPUTER SOC, 244-248. Peacock, S., M. Maltrud, and R. Bleck, 2005 Putting models to the data test: A case study using Indian Ocean CFC-11 data. Ocean Modelling, 9, 1-22. Prasad, T. G., J. L. McClean, E. C. Hunke, A. J. Semtner, and D. Ivanova, 2005 A numerical study of the western Cosmonaut polynya in a coupled ocean-sea ice model. Journal of Geophsical Research-Part C-Oceans, 110, 21p. Proshutinsky, A., and Coauthors, 2005: Arctic ocean study—Synthesis of model results and observations.. EOS, 86, 368–371. Treguier, A. M., and Coauthors, 2005 The North Atlantic subpolar gyre in four high-resolution models. Journal of Physical Oceanography, 35, 757-774. Weijer, W., 2005 High-frequency wind forcing of a channel model of the ACC: Normal mode excitation. Ocean Modelling, 9, 31-50. Weijer, W., and S. T. Gille, 2005 Adjustment of the Southern Ocean to wind forcing on synoptic time scales. Journal of Physical Oceanography, 35, 2076-2089. Weijer, W., and S. T. Gille, 2005 Energetics of wind-driven barotropic variability in the Southern Ocean. Journal of Marine Research, 63, 1101-1125.
2004Belviso, S., and Coauthors, 2004 Comparison of global climatological maps of sea surface dimethyl sulfide. Global Biogeochemical Cycles, 18, GB3013. Benjamin, S. G., G. A. Grell, J. M. Brown, T. G. Smirnova, and R. Bleck, 2004 Mesoscale weather prediction with the RUC hybrid isentropic-terrain-following coordinate model. Monthly Weather Review, 132, 473-494. Bleck, R., and S. Sun, 2004 Diagnostics of the oceanic thermohaline circulation in a coupled climate model. Global and Planetary Change, 40, 233-248. Cheng, W., R. Bleck, and C. Rooth, 2004 Multi-decadal thermohaline variability in an ocean-atmosphere general circulation model. Climate Dynamics, 22, 573-590. Chu, S., S. Elliott, M. Maltrud, and F. Chai, 2004: Iron patch enrichments in the Southern Ocean of a global eddy permitting general circulation model. Environmental Sciences and Environmental Computing, 2, 8. Chu, S., S. Elliott, M. Maltrud, J. Rodriguez, and D. J. Erickson, 2004 Ecodynamic and eddy admitting simulations of dimethyl sulfide distributions in a global ocean biogeochemistry-circulation model. Earth Interactions, 8, 1-25. Connolley, W. M., J. M. Gregory, E. Hunke, and A. J. McLaren, 2004 On the consistent scaling of terms in the sea-ice dynamics equation. Journal of Physical Oceanography, 34, 1776-1780. Dijkstra, H. A., L. T. Raa, and W. Weijer, 2004: A systematic approach to determine thresholds of the ocean's thermohaline circulation. Tellus, Series A (Dynamic Meteorology and Oceanography), 56A, 362-370. Elliott, S., S. Chu, M. Maltrud, and A. McPherson, 2004: Animation of global marine chlorophyll distributions from fine grid biogeochemistry/transport modeling. Environmental Sciences and Environmental Computing, 2, 9. Lipscomb, W. H., and E. C. Hunke, 2004 Modeling sea ice transport using incremental remapping. Monthly Weather Review, 132, 1341-1354. McClean, J. L., and Coauthors, 2004: Towards a high-resolution global coupled Navy prediction system. Proceedings - Department of Defense High Performance Computing Modernization Program Users Group Conference, UGC 2004, 233-237. Pierce, D. W., T. P. Barnett, R. Tokmakian, A. Semtner, M. Maltrud, J. Lysne, and A. Craig, 2004 The ACPI project, Element 1: initializing a coupled climate model from observed conditions. Climatic Change, 62, 13-28. Smith, R. D., and P. R. Gent, 2004 Anisotropic Gent-McWilliams parameterization for ocean models. Journal of Physical Oceanography, 34, 2541-2564. Wennberg, P. O., S. Peacock, J. T. Randerson, and R. Bleck, 2004 Recent changes in the air-sea gas exchange of methyl choloroform. Geophysical Research Letters, 31, L16112-16114. Wingate, B. A., 2004 The maximum allowable time step for the shallow water alpha model and its relation to time-implicit differencing. Monthly Weather Review, 132, 2719-2731.
2003Bleck, R., and S. Sun, 2003: Diagnostics of the oceanic thermohaline circulation in a coupled climate model. Global and Planet. Change, 40, 233-248. Chassignet, E. P., L. T. Smith, G. R. Halliwell, and R. Bleck, 2003: North Atlantic simulations with the Hybrid Coordinate Ocean Model (HYCOM): Impact of the vertical coordinate choice, reference pressure, and thermobaricity. Journal of Physical Oceanography, 33, 2504-2526. Chu, S. P., S. Elliott, and M. E. Maltrud, 2003: Global eddy permitting simulations of surface ocean nitrogen, iron, sulfur cycling. Chemosphere, 50, 223-235. Dijkstra, H. A., and W. Weijer, 2003: Stability of the global ocean circulation: The connection of equilibria within a hierarchy of models. Journal of Marine Research, 61, 725-743. Dijkstra, H. A., W. Weijer, and J. D. Neelin, 2003: Imperfections of the three-dimensional thermohaline circulation: Hysteresis and unique-state regimes. Journal of Physical Oceanography, 33, 2796-2814. Elliott, S., D. R. Blake, N. J. Blake, M. K. Dubey, F. S. Rowland, B. C. Sive, and F. A. Smith, 2003: BIBLE A whole-air sampling as a window on Asian biogeochemistry - art. no. 8407. Journal of Geophysical Research-Atmospheres, 108, 8407-8407. Elliott, S., and S. Chu, 2003: Comment on "Ocean fertilization experiments may initiate a large scale phytoplankton bloom" by Z. Neufeld et al. Geophysical Research Letters, 30, 7-1. Esenkov, O. E., D. B. Olson, and R. Bleck, 2003: A study of the circulation and salinity budget of the Arabian Sea with an isopycnic coordinate ocean model. Deep-Sea Research, Part II (Topical Studies in Oceanography), 50, 2091-2110. Holm, D. D., and B. T. Nadiga, 2003: Modeling mesoscale turbulence in the barotropic double-gyre circulation. Journal of Physical Oceanography, 33, 2355-2365. Holm, D. D., V. Putkaradze, P. D. Weidman, and B. A. Wingate, 2003: Boundary effects on exact solutions of the Lagrangian-averaged Navier-Stokes- alpha equations. Journal of Statistical Physics, 113, 841-854. Maslowski, W., and W. H. Lipscomb, 2003: High resolution simulations of Arctic sea ice, 1979-1993. Polar Research, 22, 67-74. McGillicuddy, D. J., L. A. Anderson, S. C. Doney, and M. E. Maltrud, 2003: Eddy-driven sources and sinks of nutrients in the upper ocean: Results from a 0.1 degrees resolution model of the North Atlantic - art. no. 1035. Global Biogeochemical Cycles, 17, 1035-1035. Nadiga, B. T., 2003: Modeling Mesoscale Turbulence in the Double Gyre Circulation. Proceedings of the 18th Stanstead Seminar: Climate Variability and Predictability from seasons to decades. Smith, R. D., and J. C. McWilliams, 2003: Anisotropic horizontal viscosity for ocean models. Ocean Modelling, 5, 129-156. Treguier, A. M., N. G. Hogg, M. Maltrud, K. Speer, and V. Thierry, 2003: The origin of deep zonal flows in the Brazil Basin. Journal of Physical Oceanography, 33, 580-599. Weijer, W., and H. A. Dijkstra, 2003: Multiple oscillatory modes of the global ocean circulation. Journal of Physical Oceanography, 33, 2197-2213. Weijer, W., H. A. Dijkstra, H. Oksuzoglu, F. W. Wubs, and A. C. de Niet, 2003: A fully-implicit model of the global ocean circulation. Journal of Computational Physics, 192, 452-470.
2002Bleck, R., 2002 An oceanic general circulation model framed in hybrid isopycnic-Cartesian coordinates. Ocean Modelling, 4, 55-88. Bleck, R., 2002 Erratum to: An Oceanic general circulation model framed in hybrid isopycnic-Cartesian coordinates [Ocean Modelling 4 (2002) 55-88]. Ocean Modelling, 4, 219-219. Doney, S. C., and M. W. Hecht, 2002 Antarctic Bottom Water formation and deep-water chlorofluorocarbon distributions in a global ocean climate model. Journal of Physical Oceanography, 32, 1642-1666. Dutay, J. C., and Coauthors, 2002 Evaluation of ocean model ventilation with CFC-11: comparison of 13 global ocean models. Ocean Modelling, 4, 89-120. Hu, A. X., C. Rooth, R. Bleck, and C. Deser, 2002 NAO influence on sea ice extent in the Eurasian coastal region - art. no. 2053. Geophysical Research Letters, 29, 2053-2053. Hunke, E. C., and J. K. Dukowicz, 2002 The elastic-viscous-plastic sea ice dynamics model in general orthogonal curvilinear coordinates on a sphere-incorporation of metric terms. Monthly Weather Review, 130, 1848-1865. McClean, J. L., P. M. Poulain, J. W. Pelton, and M. E. Maltrud, 2002 Eulerian and Lagrangian statistics from surface drifters and a high-resolution POP simulation in the North Atlantic. Journal of Physical Oceanography, 32, 2472-2491. Mullineaux, L. S., K. G. Speer, A. M. Thurnherr, M. E. Maltrud, and A. Vangriesheim, 2002: Implications of cross-axis flow for larval dispersal along mid-ocean ridges. Cahiers de Biologie Marine, 43, 281-284. Randall, D. A., T. D. Ringler, R. P. Heikes, P. Jones, and J. Baumgardner, 2002 Climate modeling with spherical geodesic grids. Computing in Science & Engineering, 4, 32-41. Ringler, T. D., and D. A. Randall, 2002 The ZM grid: an alternative to the Z grid. Monthly Weather Review, 130, 1411-1422. Weijer, W., W. P. M. De Ruijter, A. Sterl, and S. S. Drujfhout, 2002 Response of the Atlantic overturning circulation to South Atlantic sources of buoyancy. Global and Planetary Change, 34, 293-311.
2001Ackley, S. F., C. A. Geiger, J. C. King, E. C. Hunke, and J. Comiso, 2001: The Ronne polynya of 1997/98: observations of air-ice-ocean interaction. Annals of Glaciology, 33, 425-429. Blackmon, M., and Coauthors, 2001: The Community Climate System Model. Bulletin of the American Meteorological Society, 82, 2357-2376. Bos, L., M. A. Taylor, and B. A. Wingate, 2001: Tensor product Gauss-Lobatto points are Fekete points for the cube. Mathematics of Computation, 70, 1543-1547. Chu, S. P., and S. Elliott, 2001: Latitude versus depth simulations of ecodynamics and dissolved gas chemistry relationships in the central pacific. Journal of Atmospheric Chemistry, 40, 305-333. Dukowicz, J. K., 2001: Reduction of density and pressure gradient errors in ocean simulations. Journal of Physical Oceanography, 31, 1915-1921. Garfield, N., M. E. Maltrud, C. A. Collins, T. A. Rago, and R. G. Paquette, 2001: Lagrangian flow in the California Undercurrent, an observation and model comparison. Journal of Marine Systems, 29, 201-220. Hunke, E. C., 2001: Viscous-plastic sea ice dynamics with the EVP model: linearization issues. Journal of Computational Physics, 170, 18-38. Hunke, E. C., 2001: The Elastic-Viscous-Plastic Sea Ice Dynamics Model: A Review. Scaling Laws in Ice Mechanics and Ice Dynamics, J. P. Dempsey, and H. H. Shen, Eds., Kluwer, 289–299. Hunke, E. C., and S. F. Ackley, 2001: A numerical investigation of the 1997-1998 Ronne polynya. Journal of Geophysical Research, 106, 22373-22382. Komatitsch, D., R. Martin, J. Tromp, M. A. Taylor, and B. A. Wingate, 2001: Wave propagation in 2-D elastic media using a spectral element method with triangles and quadrangles. Journal of Computational Acoustics, 9, 703-718. Lipscomb, W. H., 2001: Remapping the thickness distribution in sea ice models. Journal of Geophysical Research, 106, 13989-14000. McClean, J. L., W. Maslowski, and M. Maltrud, 2001: Towards a coupled environmental prediction system. 2001 International Conference on Computational Science (ICCS 2001), 28-30 May 2001, San Francisco, CA, USA, Berlin, Germany : Springer-Verlag, 2001, p.1098-1107. Nadiga, B. T., and B. P. Luce, 2001: Global bifurcation of Shilnikov type in a double-gyre ocean model. Journal of Physical Oceanography, 31, 2669-2690. Nadiga, B. T., and L. G. Margolin, 2001: Dispersive-dissipative eddy parameterization in a barotropic model. Journal of Physical Oceanography, 31, 2525-2531. Nadiga, B. T., and S. Shkoller, 2001: Enhancement of the inverse-cascade of energy in the two-dimensional Lagrangian-averaged Navier-Stokes equations. Physics of Fluids, 13, 1528-1531. Sun, S., and R. Bleck, 2001: Atlantic thermohaline circulation and its response to increasing CO{sub 2} in a coupled atmosphere-ocean model. Geophysical Research Letters, 28, 4223-4226. Sun, S., and R. Bleck, 2001: Thermohaline circulation studies with an isopycnic coordinate ocean model. Journal of Physical Oceanography, 31, 2761-2782. Vukicevic, T., M. Steyskal, M. Hecht, 2001: Properties of Advection Algorithms in the Context of Variational Data Assimilation, Month. Weath. Review, 129, 1221--1231. Weijer, W., W. P. M. De Ruijter, and H. A. Dijkstra, 2001: Stability of the Atlantic overturning circulation: competition between Bering Strait freshwater flux and Agulhas heat and salt sources. Journal of Physical Oceanography, 31, 2385-2402. Weijer, W., and H. A. Dijkstra, 2001: A bifurcation study of the three-dimensional thermohaline ocean circulation: The double hemispheric case. Journal of Marine Research, 59, 599-631. Yu, J. Y., and R. C. Malone, 2001: A global parallel high-resolution UCLA-POP coupled atmosphere-ocean GCM for assessing climate and variability in the ocean. Symposium on Climate Variability, the Oceans and Societal Impacts; January 14-18, 2001; ALBUQUERQUE, NEW MEXICO, ALBUQUERQUE, NEW MEXICO, BOSTON:AMER METEOROLOGICAL SOCIETY, 160-162. Zhang, Y. X., and E. C. Hunke, 2001: Recent Arctic change simulated with a coupled ice-ocean model. Journal of Geophysical Research-Oceans, 106, 4369-4390.
2000Baker, R. D., G. Schubert, and P. W. Jones, 2000: Convectively generated internal gravity waves in the lower atmosphere of Venus. Part I: No wind shear. Journal of the Atmospheric Sciences, 57, 184-199. Chu, S. P., and S. Elliott, 2000: Eddy resolving nutrient ecodynamics in the global Parallel Ocean Program and connections with trace gases in the sulfur, halogen and NMHC cycles. Proceedings of SPIE - The International Society for Optical Engineering, 4172, 96-101. Dukowicz, J. K., and J. R. Baumgardner, 2000: Incremental remapping as a transport/advection algorithm. Journal of Computational Physics, 160, 318-335. Greatbatch, R. J., and B. T. Nadiga, 2000: Four-gyre circulation in a barotropic model with double-gyre wind forcing. Journal of Physical Oceanography, 30, 1461-1471. Kooyman, G. L., E. C. Hunke, S. F. Ackley, R. P. van Dam, and G. Robertson, 2000: Moult of the emperor penguin: Travel, location, and habitat selection. Marine Ecology Progress Series, 204, 269-277. Nadiga, B. T., 2000: Scaling properties of an inviscid mean-motion fluid model. Journal of Statistical Physics, 98, 935-948. Ringler, T. D., R. P. Heikes, and D. A. Randall, 2000: Modeling the atmospheric general circulation using a spherical geodesic grid: a new class of dynamical cores. Monthly Weather Review, 128, 2471-2490. Smith, L. T., E. P. Chassignet, and R. Bleck, 2000: The impact of lateral boundary conditions and horizontal resolution on North Atlantic water mass transformations and pathways in an isopycnic coordinate ocean model. Journal of Physical Oceanography, 30, 137-159. Smith, R. D., M. E. Maltrud, F. O. Bryan, and M. W. Hecht, 2000: Numerical simulation of the North Atlantic Ocean at 1/10 degrees. Journal of Physical Oceanography, 30, 1532-1561. Taylor, M. A., and B. A. Wingate, 2000: Generalized diagonal mass matrix spectral element method for non-quadrilateral elements. Applied Numerical Mathematics, 33, 259-265. Taylor, M. A., B. A. Wingate, and R. E. Vincent, 2000: An algorithm for computing Fekete points in the triangle. SIAM Journal On Numerical Analysis, 38, 1707-1720. Vigan, X., C. Provost, R. Bleck, and P. Courtier, 2000: Sea surface velocities from sea surface temperature image sequences. 1. Method and validation using primitive equation model output. Journal of Geophysical Research, 105, 19499-19514.
1999Baker, R. D., G. Schubert, and P. W. Jones, 1999: High Rayleigh number compressible convection in Venus' atmosphere: penetration, entrainment, and turbulence. Journal of Geophysical Research, 104, 3815-3832. Best, S. E., V. O. Ivchenko, K. J. Richards, R. D. Smith, and R. C. Malone, 1999: Eddies in numerical models of the Antarctic Circumpolar Current and their influence on the mean flow. Journal of Physical Oceanography, 29, 328-350. Bitz, C. M., and W. H. Lipscomb, 1999: An energy-conserving thermodynamic model of sea ice. Journal of Geophysical Research, 104, 15669-15677. Bryan, K., J. K. Dukowicz, and R. D. Smith, 1999: On the mixing coefficient in the parameterization of bolus velocity. Journal of Physical Oceanography, 29, 2442-2456. Chu, S. P., L. A. McNair, S. Elliott, C. C. A. Lai, O. A. Hurricane, R. P. Turco, and R. C. Dugdale, 1999: Ecodynamics and dissolved gas chemistry routines for ocean circulation models. Computers & Chemistry, 23, 447-467. de Ruijter, W. P. M., and Coauthors, 1999: Indian-Atlantic interocean exchange: dynamics, estimation and impact. Journal of Geophysical Research, 104, 20885-20910. Dukowicz, J. K., and R. J. Greatbatch, 1999: The bolus velocity in the stochastic theory of ocean turbulent tracer transport. Journal of Physical Oceanography, 29, 2232-2239. Dukowicz, J. K., and R. J. Greatbatch, 1999: Evolution of mean-flow Fofonoff gyres in barotropic quasigeostrophic turbulence. Journal of Physical Oceanography, 29, 1832-1852. Hunke, E. C., and Y. Zhang, 1999: A comparison of sea ice dynamics models at high resolution. Monthly Weather Review, 127, 396-408. Jones, P. W., 1999: First- and second-order conservative remapping schemes for grids in spherical coordinates. Monthly Weather Review, 127, 2204-2210. Ringler, T. D., and K. H. Cook, 1999: Understanding the seasonality of orographically forced stationary waves: interaction between mechanical and thermal forcing. Journal of the Atmospheric Sciences, 56, 1154-1174. Shaoping, C., L. A. McNair, S. Elliott, A. L. Chung-Chieng, O. A. Hurricane, R. P. Turco, and R. C. Dugdale, 1999: Ecodynamics and dissolved gas chemistry routines for ocean circulation models. Computers & Chemistry, 23, 447-467. Smith, R. D., 1999: The primitive equations in the stochastic theory of adiabatic stratified turbulence. Journal of Physical Oceanography, 29, 1865-1880. Sun, S., R. Bleck, C. Rooth, J. Dukowicz, E. Chassignet, and P. Killworth, 1999: Inclusion of thermobaricity in isopycnic-coordinate ocean models. Journal of Physical Oceanography, 29, 2719-2729. Weijer, W., W. P. M. de Ruiter, H. A. Dijkstra, and P. J. van Leeuwen, 1999: Impact of interbasin exchange on the Atlantic overturning circulation. Journal of Physical Oceanography, 29, 2266-2284.
1998Baker, R. D., G. Schubert, and P. W. Jones, 1998: Cloud-level penetrative compressible convection in the Venus atmosphere. Journal of the Atmospheric Sciences, 55, 3-18. Dazlich, D. A., T. D. Ringler, and D. A. Randall, 1998: High resolution surface flux calculations with the Colorado State University General Circulation Model. 9th Conference on Interaction of the Sea and Atmosphere at the 78th American-Meteorogical-Society Annual Meeting; January 11-16, 1998; PHOENIX, AZ, BOSTON:AMER METEOROLOGICAL SOC, 85-86. Griffies, S. M., A. Gnanadesikan, R. C. Pacanowski, V. D. Larichev, J. K. Dukowicz, and R. D. Smith, 1998: Isoneutral diffusion in a z-coordinate ocean model. Journal of Physical Oceanography, 28, 805-830. Hecht, M. W., F. O. Bryan, and W. R. Holland, 1998: A consideration of tracer advection schemes in a primitive equation ocean model. Journal of Geophysical Research, 103, 3301-3321. Levermore, C. D., W. J. Morokoff, and B. T. Nadiga, 1998: Moment realizability and the validity of the Navier-Stokes equations for rarefied gas dynamics. Physics of Fluids, 10, 3214-3226. Maltrud, M. E., R. D. Smith, A. J. Semtner, and R. C. Malone, 1998: Global eddy-resolving ocean simulations driven by 1985-1995 atmospheric winds. Journal of Geophysical Research, 103, 30825-30853. McPherson, A., and M. Maltrud, 1998: POPTEX: Interactive ocean model visualization using texture mapping hardware. Proceedings of the IEEE Visualization Conference, 471-474.
1997Dukowicz, J. K., 1997: Comments on ''Stability of the viscous-plastic sea ice rheology''. Journal of Physical Oceanography, 27, 480-481. Dukowicz, J. K., and R. D. Smith, 1997: Stochastic theory of compressible turbulent fluid transport. Physics of Fluids, 9, 3523-3529. Elliott, S., and Coauthors, 1997: Atmospheric effects of the emerging mainland Chinese transportation system at and beyond the regional scale. Journal of Atmospheric Chemistry, 27, 31-70. Hayashi, Y., D. G. Golder, and P. W. Jones, 1997: Tropical gravity waves and superclusters simulated by high-horizontal-resolution SKYHI general circulation models. Journal of the Meteorological Society of Japan, 75, 1125-1139. Hunke, E. C., and J. K. Dukowicz, 1997: An elastic-viscous-plastic model for sea ice dynamics. Journal of Physical Oceanography, 27, 1849-1867. Jones, P. W., K. Hamilton, and R. J. Wilson, 1997: A very high resolution general circulation model simulation of the global circulation in austral winter. Journal of the Atmospheric Sciences, 54, 1107-1116. Nadiga, B. T., M. W. Hecht, L. G. Margolin, and P. K. Smolarkiewicz, 1997: On simulating flows with multiple time scales using a method of averages. Theoretical and Computational Fluid Dynamics, 9, 281-292. Ringler, T. D., and K. H. Cook, 1997: Factors controlling nonlinearity in mechanically forced stationary waves over orography. Journal of the Atmospheric Sciences, 54, 2612-2628.
1996Fu, L. L., and R. D. Smith, 1996: Global ocean circulation from satellite altimetry and high-resolution computer simulation. Bulletin of the American Meteorological Society, 77, 2625-2636. Holm, D., B. Malone, and L. Margolin, 1996: Nonlinear phenomena in ocean dynamics - Special issue originating from the 15th Annual International Conference of the Center for Nonlinear Studies Los Alamos, NM, USA, 15-19 May 1995. Physica D, 98, R5-R6. Jones, P. W., 1996: The Los Alamos Parallel Ocean Program (POP) and coupled model on MPP and clustered SMP architectures. 7th ECMWF Workshop on the Use of Parallel Processors in Meteorology; November 2-6, 1996; READING, ENGLAND, READING, ENGLAND, SINGAPORE:WORLD SCIENTIFIC PUBL CO PTE LTD, 226-238. Lee-Lueng, F., and R. D. Smith, 1996: Global ocean circulation from satellite altimetry and high-resolution computer simulation. Bulletin of the American Meteorological Society, 77, 2625-2636. Nadiga, B. T., L. G. Margolin, and P. K. Smolarkiewicz, 1996: Different approximations of shallow fluid flow over an obstacle. Physics of Fluids, 8, 2066-2077. Nadiga, B. T., and S. Zaleski, 1996: Investigations of a two-phase fluid model. European Journal of Mechanics, B/Fluids, 15, 885-896. Treguier, A. M., J. K. Dukowicz, and K. Bryan, 1996: Properties of nonuniform grids used in ocean general circulation models. Journal of Geophysical Research, 101, 20877-20881.
1995Dukowicz, J. K., 1995: Mesh effects for Rossby waves. Journal of Computational Physics, 119, 188-194. Hecht, M. W., W. R. Holland, and P. J. Rasch, 1995: Upwind-weighted advection schemes for ocean tracer transport: an evaluation in a passive tracer context. Journal of Geophysical Research, 100, 20763-20778. Jones, P. W., C. L. Kerr, and R. S. Hemler, 1995: Practical considerations in development of a parallel SKYHI general circulation model. Parallel Computing, 21, 1677-1694. Nadiga, B. T., 1995: An Euler solver based on locally adaptive discrete velocities. Journal of Statistical Physics, 81, 129-146. Nadiga, B. T., 1995: An adaptive discrete-velocity model for the shallow water equations. Journal of Computational Physics, 121, 271-280. Nadiga, B. T., L. G. Margolin, and P. K. Smolarkiewicz, 1995: Semi-Lagrangian shallow water modeling on the CM-5. Parallel Computational Fluid Dynamics, 26-29 June 1995, Pasedena, CA, USA, Amsterdam, Netherlands : Elsevier, 1996, p.529-536. Ringler, T. D., and K. H. Cook, 1995: OROGRAPHICALLY INDUCED STATIONARY WAVES - DEPENDENCE ON LATITUDE. Journal of the Atmospheric Sciences, 52, 2548-2560. Sun, Z. P., R. P. Turco, R. L. Walterscheid, S. V. Venkateswaran, and P. W. Jones, 1995: Thermospheric response to morningside diffuse aurora: high-resolution three-dimensional simulations. Journal of Geophysical Research, 100, 23779-23793.
1994Dukowicz, J. K., 1994: Computational efficiency of the hybrid penalty-pseudocompressibility method for incompressible flow. Computers & Fluids, 23, 479-486. Dukowicz, J. K., and R. D. Smith, 1994: Implicit free-surface method for the Bryan-Cox-Semtner ocean model. Journal of Geophysical Research, 99, 7991-8014. Goldstein, D., and B. T. Nadiga, 1994: COMPRESSIBLE CHANNEL FLOW USING 2 DISCRETE VELOCITY GAS MODELS. Progress in Astronautics and Aeronautics, 159, 3-14. Hunke, E. C., 1994: Numerical solution of the transformed Eliassen balanced vortex model of a tropical cyclone. Physica D, 77, 60-76. Nadiga, B. T., 1994: PLANE-WAVES IN A MULTISPEED DISCRETE VELOCITY GAS. Progress in Astronautics and Aeronautics, 159, 313-327. Nadiga, B. T., and D. I. Pullin, 1994: A method for near-equilibrium discrete-velocity gas flows. Journal of Computational Physics, 112, 162-172. Nadiga, B. T., and B. Sturtevant, 1994: Shock structure in a nine-velocity gas. Physica D, 73, 205-216.
1993Dukowicz, J. K., R. D. Smith, and R. C. Malone, 1993: A reformulation and implementation of the Bryan-Cox-Semtner ocean model on the Connection Machine. Journal of Atmospheric and Oceanic Technology, 10, 195-208. Dvinsky, A. S., and J. K. Dukowicz, 1993: Null-space-free methods for the incompressible Navier-Stokes equations on non-staggered curvilinear grids. Computers & Fluids, 22, 685-696. Vallis, G. K., and M. E. Maltrud, 1993: Generation of mean flows and jets on a beta plane and over topography. Journal of Physical Oceanography, 23, 1346-1352.
1992Dukowicz, J. K., and A. S. Dvinsky, 1992: Approximate factorization as a high order splitting for the implicit incompressible flow equations. Journal of Computational Physics, 102, 336-347. Dukowicz, J. K., and B. J. A. Meltz, 1992: Vorticity errors in multidimensional lagrangian codes. Journal of Computational Physics, 99, 115-134. Smith, R. D., J. K. Dukowicz, and R. C. Malone, 1992: Parallel ocean general circulation modeling. Physica D, 60, 38-61.
1991Smith, R. D., J. K. Dukowicz, and R. C. Malone, 1991: Ocean modeling on the Connection Machine. Supercomputing '91, 18-22 Nov. 1991, Albuquerque, NM, USA, Los Alamitos, CA, USA : IEEE Comput. Soc. Press, 1991, p.679.
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